BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E06SP1|AL429912
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1668 0.0
>3x_Contig1806
Length = 53694
Score = 1668 bits (838), Expect = 0.0
Identities = 853/860 (99%), Gaps = 1/860 (0%)
Strand = Plus / Minus
Query: 1 gatcctgcatgcatcctcatataatcatttgacacagaagacgaatacaatatatagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46483 gatcctgcatgcatcctcatataatcatttgacacagaagacgaatacaatatatagtaa 46424
Query: 61 ctcttaatagagaactaatattttgtttgctgaatccttgttaccgcatgttgagcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46423 ctcttaatagagaactaatattttgtttgctgaatccttgttaccgcatgttgagcaact 46364
Query: 121 atctctagttttttaataccccacaattgcgttcttaacatcctatttgcgtttttaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46363 atctctagttttttaataccccacaattgcgttcttaacatcctatttgcgtttttaaag 46304
Query: 181 awgcctaattatcttttgtgctctcaatcgawacctatttgaacctgagawttaattcca 240
| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 46303 atgcctaattatcttttgtgctctcaatcgatacctatttgaacctgagatttaattcca 46244
Query: 241 cgtgatcwaatctgacgagtcacttgtaatattgtgtgatgcgaaa-ctgtcgcaactta 299
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 46243 cgtgatctaatctgacgagtcacttgtaatattgtgtgatgcgaaagctgtcgcaactta 46184
Query: 300 accttccactgattaaagaaattcgtaaagcgttacgttatggtcagttgtcttaataag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46183 accttccactgattaaagaaattcgtaaagcgttacgttatggtcagttgtcttaataag 46124
Query: 360 gaacgtggaactgtgtgcctatcaatgataagctacctaacatcgcctgtatatcaagaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46123 gaacgtggaactgtgtgcctatcaatgataagctacctaacatcgcctgtatatcaagaa 46064
Query: 420 ttgtaatcaatgaaaactcaagaagtgtatagattcaatataaawaacagactctggaat 479
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 46063 ttgtaatcaatgaaaactcaagaagtgtatagattcaatataaatatcagactctggaat 46004
Query: 480 ttgctgaaagaaaactaacaccgacttacagagtaatcttaaatgaaagttttttttctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46003 ttgctgaaagaaaactaacaccgacttacagagtaatcttaaatgaaagttttttttctt 45944
Query: 540 agccataacgtccaatacttcacagcctattactgcatattatttttcaaggtatgacga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45943 agccataacgtccaatacttcacagcctattactgcatattatttttcaaggtatgacga 45884
Query: 600 tgtgagtaactgacggacccattgaatcacggattctctcgactaaattattattctttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45883 tgtgagtaactgacggacccattgaatcacggattctctcgactaaattattattctttc 45824
Query: 660 aagtagcctatttaatatattggataaatttctcccttgtcttacttctctcgttcatct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45823 aagtagcctatttaatatattggataaatttctcccttgtcttacttctctcgttcatct 45764
Query: 720 ggcagccactacatgtgcatatgcacaaaatatagactaagcaagtgcgttcagaataaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45763 ggcagccactacatgtgcatatgcacaaaatatagactaagcaagtgcgttcagaataaa 45704
Query: 780 gttttttttttttcattgcatgagggccgaagaattccctgcagaaaagctggtttcaga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45703 gttttttttttttcattgcatgagggccgaagaattccctgcagaaaagctggtttcaga 45644
Query: 840 aggaggcatcaattatacgg 859
||||||||||||||||||||
Sbjct: 45643 aggaggcatcaattatacgg 45624
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,582
Number of Sequences: 1807
Number of extensions: 12582
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)